SFHG
From HP-SEE Wiki
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== Scientific and Social Impact == | == Scientific and Social Impact == | ||
- | |||
- | == Collaborations | + | == Collaborations == |
- | '' | + | |
+ | == Beneficiaries == | ||
+ | |||
+ | |||
+ | == Number of users == | ||
+ | |||
+ | |||
+ | == Development Plan == | ||
+ | |||
+ | * Concept: ''.'' | ||
+ | * Start of alpha stage: ''.'' | ||
+ | * Start of beta stage: ''.'' | ||
+ | * Start of testing stage: ''.'' | ||
+ | * Start of deployment stage: ''.'' | ||
+ | * Start of production stage: ''.'' | ||
+ | |||
+ | == Resource Requirements == | ||
+ | |||
+ | * Number of cores required for a single run: ''512'' | ||
+ | * Minimum RAM/core required: ''1GB'' | ||
+ | * Storage space during a single run: ''10GB'' | ||
+ | * Long-term data storage: ''40GB'' | ||
+ | * Total core hours required: ''.'' | ||
== Technical Features and HP-SEE Implementation == | == Technical Features and HP-SEE Implementation == | ||
- | * Primary programming language: FORTRAN | + | * Primary programming language: ''FORTRAN'' |
- | * Parallel programming paradigm: MPI | + | * Parallel programming paradigm: ''MPI'' |
* Main parallel code: ''Tobefilledin'' | * Main parallel code: ''Tobefilledin'' | ||
- | * Pre/post processing code: '' | + | * Pre/post processing code: ''.'' |
- | * Application tools and libraries: '' | + | * Application tools and libraries: ''.'' |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
== Usage Example == | == Usage Example == | ||
- | '' | + | |
+ | == Infrastructure Usage == | ||
+ | |||
+ | * Home system: ''.'' | ||
+ | ** Applied for access on: ''.'' | ||
+ | ** Access granted on: ''.'' | ||
+ | ** Achieved scalability: ''.'' | ||
+ | * Accessed production systems: ''.'' | ||
+ | # ''.'' | ||
+ | #* Applied for access on: ''.'' | ||
+ | #* Access granted on: ''.'' | ||
+ | #* Achieved scalability: ''.'' | ||
+ | * Porting activities: ''.'' | ||
+ | * Scalability studies: ''.'' | ||
+ | |||
+ | == Running on Several HP-SEE Centres == | ||
+ | |||
+ | * Benchmarking activities and results: ''.'' | ||
+ | * Other issues: ''.'' | ||
+ | |||
+ | == Achieved Results == | ||
+ | |||
== Publications == | == Publications == | ||
- | + | ||
+ | == Foreseen Activities == |
Revision as of 18:18, 21 March 2012
General Information
- Application's name: Self Avoiding Hamiltonian Walk on Gaskets
- Application's acronym: SFHG
- Virtual Research Community: Computational Physics Applications
- Scientific contact: Sreten Lekic, slekic@blic.net
- Technical contact: Sreten Lekic, slekic@blic.net
- Developers: Sreten Lekic, Faculty of Mech. Engineering, University of Banja Luka (UoBL), Bosnia - Herzegovina
- Web site: http://wiki.hp-see.eu/index.php/SFHG
Short Description
Hamiltonian self avoiding walks on fractals (Sierpinsky gaskets) are one of perspective models for long polymers (DNA, RNA and other bio polymers) behavior description.
FORTRAN algorithms for 2D and 3D were tested on multiprocessors core.
Problems Solved
Initial parallelization of process, partitioning.
Scientific and Social Impact
Collaborations
Beneficiaries
Number of users
Development Plan
- Concept: .
- Start of alpha stage: .
- Start of beta stage: .
- Start of testing stage: .
- Start of deployment stage: .
- Start of production stage: .
Resource Requirements
- Number of cores required for a single run: 512
- Minimum RAM/core required: 1GB
- Storage space during a single run: 10GB
- Long-term data storage: 40GB
- Total core hours required: .
Technical Features and HP-SEE Implementation
- Primary programming language: FORTRAN
- Parallel programming paradigm: MPI
- Main parallel code: Tobefilledin
- Pre/post processing code: .
- Application tools and libraries: .
Usage Example
Infrastructure Usage
- Home system: .
- Applied for access on: .
- Access granted on: .
- Achieved scalability: .
- Accessed production systems: .
- .
- Applied for access on: .
- Access granted on: .
- Achieved scalability: .
- Porting activities: .
- Scalability studies: .
Running on Several HP-SEE Centres
- Benchmarking activities and results: .
- Other issues: .