SFHG

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	== Scientific and Social Impact ==		== Scientific and Social Impact ==
-	''Not applicable yet as the application is mostly pushed to Y2 of the project''
-	== Collaborations and Beneficiaries ==	+	== Collaborations ==
-	''Not applicable yet as the application is mostly pushed to Y2 of the project''	+
		+	== Beneficiaries ==
		+
		+
		+	== Number of users ==
		+
		+
		+	== Development Plan ==
		+
		+	* Concept: ''.''
		+	* Start of alpha stage: ''.''
		+	* Start of beta stage: ''.''
		+	* Start of testing stage: ''.''
		+	* Start of deployment stage: ''.''
		+	* Start of production stage: ''.''
		+
		+	== Resource Requirements ==
		+
		+	* Number of cores required for a single run: ''512''
		+	* Minimum RAM/core required: ''1GB''
		+	* Storage space during a single run: ''10GB''
		+	* Long-term data storage: ''40GB''
		+	* Total core hours required: ''.''
	== Technical Features and HP-SEE Implementation ==		== Technical Features and HP-SEE Implementation ==
-	* Primary programming language: FORTRAN	+	* Primary programming language: ''FORTRAN''
-	* Parallel programming paradigm: MPI	+	* Parallel programming paradigm: ''MPI''
	* Main parallel code: ''Tobefilledin''		* Main parallel code: ''Tobefilledin''
-	* Pre/post processing code: ''Not applicable yet as the application is mostly pushed to Y2 of the project''	+	* Pre/post processing code: ''.''
-	* Application tools and libraries: ''Not applicable yet as the application is mostly pushed to Y2 of the project''	+	* Application tools and libraries: ''.''
-	* Number of cores required: 512	+
-	* Minimum RAM/core required: 1GB	+
-	* Storage space during a single run: 10GB	+
-	* Long-term data storage: 40GB	+
	== Usage Example ==		== Usage Example ==
-	''Not applicable yet as the application is mostly pushed to Y2 of the project''	+
		+	== Infrastructure Usage ==
		+
		+	* Home system: ''.''
		+	** Applied for access on: ''.''
		+	** Access granted on: ''.''
		+	** Achieved scalability: ''.''
		+	* Accessed production systems: ''.''
		+	# ''.''
		+	#* Applied for access on: ''.''
		+	#* Access granted on: ''.''
		+	#* Achieved scalability: ''.''
		+	* Porting activities: ''.''
		+	* Scalability studies: ''.''
		+
		+	== Running on Several HP-SEE Centres ==
		+
		+	* Benchmarking activities and results: ''.''
		+	* Other issues: ''.''
		+
		+	== Achieved Results ==
		+
	== Publications ==		== Publications ==
-	''Not applicable yet as the application is mostly pushed to Y2 of the project''	+
		+	== Foreseen Activities ==

---

Revision as of 18:18, 21 March 2012

Contents 1 General Information 2 Short Description 3 Problems Solved 4 Scientific and Social Impact 5 Collaborations 6 Beneficiaries 7 Number of users 8 Development Plan 9 Resource Requirements 10 Technical Features and HP-SEE Implementation 11 Usage Example 12 Infrastructure Usage 13 Running on Several HP-SEE Centres 14 Achieved Results 15 Publications 16 Foreseen Activities

General Information

• Application's name: Self Avoiding Hamiltonian Walk on Gaskets
• Application's acronym: SFHG
• Virtual Research Community: Computational Physics Applications
• Scientific contact: Sreten Lekic, slekic@blic.net
• Technical contact: Sreten Lekic, slekic@blic.net
• Developers: Sreten Lekic, Faculty of Mech. Engineering, University of Banja Luka (UoBL), Bosnia - Herzegovina
• Web site: http://wiki.hp-see.eu/index.php/SFHG

Short Description

Hamiltonian self avoiding walks on fractals (Sierpinsky gaskets) are one of perspective models for long polymers (DNA, RNA and other bio polymers) behavior description.

FORTRAN algorithms for 2D and 3D were tested on multiprocessors core.

Problems Solved

Initial parallelization of process, partitioning.

Scientific and Social Impact

Collaborations

Beneficiaries

Number of users

Development Plan

• Concept: .
• Start of alpha stage: .
• Start of beta stage: .
• Start of testing stage: .
• Start of deployment stage: .
• Start of production stage: .

Resource Requirements

• Number of cores required for a single run: 512
• Minimum RAM/core required: 1GB
• Storage space during a single run: 10GB
• Long-term data storage: 40GB
• Total core hours required: .

Technical Features and HP-SEE Implementation

• Primary programming language: FORTRAN
• Parallel programming paradigm: MPI
• Main parallel code: Tobefilledin
• Pre/post processing code: .
• Application tools and libraries: .

Usage Example

Infrastructure Usage

• Home system: .
  • Applied for access on: .
  • Access granted on: .
  • Achieved scalability: .
• Accessed production systems: .

1. .
   • Applied for access on: .
   • Access granted on: .
   • Achieved scalability: .

• Porting activities: .
• Scalability studies: .

Running on Several HP-SEE Centres

• Benchmarking activities and results: .
• Other issues: .

Achieved Results

Publications

Foreseen Activities