SFHG
From HP-SEE Wiki
General Information
- Application's name: Self Avoiding Hamiltonian Walk on Gaskets
- Application's acronym: SFHG
- Virtual Research Community: Computational Physics Applications
- Scientific contact: Sreten Lekic, slekic@blic.net
- Technical contact: Sreten Lekic, slekic@blic.net
- Developers: Sreten Lekic, Faculty of Mech. Engineering, University of Banja Luka (UoBL), Bosnia - Herzegovina
- Web site: http://wiki.hp-see.eu/index.php/SFHG
Short Description
Hamiltonian self avoiding walks on fractals (Sierpinsky gaskets) are one of perspective models for long polymers (DNA, RNA and other bio polymers) behavior description.
FORTRAN algorithms for 2D and 3D were tested on multiprocessors core.
Problems Solved
Initial parallelization of process, partitioning.
Scientific and Social Impact
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Development Plan
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Resource Requirements
- Number of cores required for a single run: 512
- Minimum RAM/core required: 1GB
- Storage space during a single run: 10GB
- Long-term data storage: 40GB
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Technical Features and HP-SEE Implementation
- Primary programming language: FORTRAN
- Parallel programming paradigm: MPI
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Usage Example
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Running on Several HP-SEE Centres
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