| Acronym
| Application Name
| Main developer
| Stage
|
| CFDOF
| CFD Analysis of Combustion
| Faculty of Mech. Engineering, University of Banja Luka (UoBL), Bosnia - Herzegovina
| testing 09.2011
|
| CompChem
| Quantum Mechanical, Molecular Mechanics, and Molecular Dynamics computation in chemistry
| Univeristy of Belgrade, Faculty of Chemistry, Republic of Serbia
| production 09.2011
|
| FMD-PA
| Design of fullerene and metal-diothiolene-based materials for photonic applications
| Computational Chemistry Group of NHRF, Greece
| production 08.2011
|
| HC-MD-QM-CS
| Hybrid Classical/Quantum Molecular Dynamics – Quantum Mechanical Computer Simulation of Condensed Phases
| UKIM, Institute of Chemistry, Faculty of Natural Science and Mathematics, FYROM
| production 08.2011
|
| ISyMAB
| Integrated System for Modeling and data Analysis of complex Biomolecules
| IFIN-HH/DPETI, Romania
| beta 09.2011
|
| MDCisplatin
| Molecular Design of Platinum Group Metal Complexes as Potential Non-classical Cisplatin Analogues
| Acad. Roumen Tsanev Institute of Molecular Biology-BAS, Bulgaria
| beta 09.2011
|
| PCACIC
| Principal component analysis of the conformational interconversions in large-ring cyclodextrins
| IOCCP-BAS, Bulgaria
| production 08.2011
|
Computational Physics is nowadays the main beneficiary of the scientific HPC, large-scale numerical computations being necessary whenever the complexity of the physical systems investigated does not allow the derivation of an analytical solution.
The main objective of the Computational Physics VRC is to join together the various physics research teams from the SEE area and to provide them access to a powerful HPC infrastructure and tools which will make possible their participation in multidisciplinary and international collaborations.
For this purpose, software developers from 6 countries contributed with 12 applications in the fields of High Energy and Particle Physics, Plasma Physics, Physics of Condensed Matter, Atomic Physics, and Computational Fluid Dynamics.
The application range extends from nanoelectronics, micro-devices optimization and the modeling of robotic devices for biomedicine, to improved means for feature detection in satellite images, which leads to better mapping, localization and search services.
| Acronym
| Application Name
| Main developer
| Stage
|
| AMR_PAR
| Parallel algorithm and program for the solving of continuum mechanics equations using Adaptive Mesh Refinement
| Institute of Mathematics and Computer Science, Laboratory of Mathematical Modelling, Republic of Moldova
| production 09.2011
|
| EagleEye
| Feature Extraction from Satellite Images Using a Hybrid Computing Architecture
| University Politehnica of Bucharest / Computer Science and Engineering, Romania
| production 08.2011
|
| FAMAD
| Fractal Algorithms for MAss Distribution
| Institute for Space Sciences, Romania
| testing 07.2011
|
| FuzzyCmeans
| Parallel Fuzzy C Means for classification/Feature detection category
| West University of Timisoara/Computer Science Department, Romania
| production 08.2011
|
| GENETATOMICS
| Genetic algorithms in atomic collisions
| Institute of Physics, Faculty of Natural Science and Mathematics, UKIM, FYROM
| production 09.2011
|
| GIM
| Geophysical Inversion Modeling
| Polytechnic University of Tirana, Albania
| testing 05.2011
|
| HAG
| High energy physics Algorithms on GPU
| Institute for Space Sciences, Romania
| testing 09.2011
|
| HMLQCD
| Hadron Masses from Lattice QCD
| University of Tirana, Albania
| production 07.2011
|
| NUQG
| Numerical study of ultra-cold quantum gases
| Scientific Computing Laboratory, Institute of Physics Belgrade, Serbia
| production 08.2011
|
| SET
| Simulation of electron transport
| Institute of Information and Communication Technologies, Bulgarian Academy of Sciences, Bulgaria
| production 08.2011
|
| SFHG
| Self Avoiding Hamiltonian Walk on Gaskets
| Faculty of Mechanical Engineering, Dept. of Thermomechanics, University of Banja Luka, Bosnia and Herzegovina
| NA
|
| SIMPLE-TS_2D
| Finite Volume Method for calculation of 2D gas-microflows using standard MPI
| Kiril Stoyanov Shterev and Stefan Kanchev Stefanov, Institute of Mechanics – BAS / Department of “Complex and multiphase Flows”, Bulgaria
| production 08.2011
|
| Acronym
| Application Name
| Main developer
| Stage
|
| CMSLTM
| Computational Models of Short and Long Term Memory
| George Kastellakis, IMBB-FORTH, Greece
| production 09.2011
|
| DeepAligner
| Deep sequencing for short fragment alignment
| Windisch Gergely, Márton Judit, Keményfi Timea, Obuda University (OU), John von Neumann Faculty of Informatics, Biotech Group, Hungary
| testing 09.2011
|
| DiseaseGene
| In-silico Disease Gene Mapper
| Windisch Gergely, MártonJudit, Keményfi Timea, Obuda University (OU), John von Neumann Faculty of Informatics, Biotech Group, Hungary
| testing 09.2011
|
| DNAMA
| DNA Multicore Analysis
| School of Computer & Communication Sciences, Laboratory for Computational Biology and Bioinformatics, RAxML software, Montenegro
| testing 09.2011
|
| MDSCS
| Molecular Dynamics Study of Complex systems
| Dr. Armen Poghosyan, Dr. Hrachya Astsatryan, National Academy of Sciences of the Republic of Armenia
| production 07.2011
|
| miRs
| Searching for novel miRNA genes and their targets
| Anastasis Oulas, IMBB/FORTH, Greece
| production 05.2011
|
| MSBP
| Modeling of some biochemical processes with the purpose of realization of their thin and purposeful synthesis
| Jumber Kereselidze, Tbilisi State University Department of Natural Science, Georgia
| testing 08.2011
|
