Job Annotation

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Revision as of 14:47, 19 February 2013 (view source) Gurov (Talk | contribs) (Created page with "In order to successfully collect accounting data users are requested to annotate each of their job submissions with their HP-SEE application. Although technically this is require...") ← Older edit		Revision as of 14:50, 19 February 2013 (view source) Gurov (Talk | contribs) (→'Recognizable Application Names) Newer edit →
Line 50:		Line 50:
	* LifeSci VRC		* LifeSci VRC
		+	** CMSLTM
		+	** DeepAligner
		+	** DiseaseGene
		+	** DNAMA
		+	** MDSCS
		+	** miRs
		+	** MSBP
		+
		+	* NewApps VRC
		+	** ISTORM
		+	** ARP23
		+	** HPS
		+	** CQS
		+	** TDN-SIM
		+	** TCR-MHC
		+	** DynAPSNeur
		+	** IPA2SPE
		+	** HGRF
		+	** NUM-EXP-NAT-CONV
		+	** PhyloTree
		+	** SU3-GT
		+	** PALSC-AMC
		+
		+	* FastTrack VRC
		+	** LNAWENR
		+	** ARMSATGEO
		+	** SyMBA_GPU

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Revision as of 14:50, 19 February 2013

In order to successfully collect accounting data users are requested to annotate each of their job submissions with their HP-SEE application. Although technically this is required only for HP-SEE users with more than one application, annotations of jobs are strongly encouraged for all users.

Contents 1 Annotating on TORQUE 2 Annotating on SGE 3 Annotating on LoadLeveler 4 'Recognizable Application Names

Annotating on TORQUE

TORQUE jobs can be easily annotated with the account string flag. Users can either annotated their jobs in the qsub command:

   qsub -A [HP-SEE Application Name] shell.sh

or in the submission shell script using a PBS directive:

   #PBS -A [HP-SEE Application Name]

Sites using TORQUE:

• Resource centre HPCG
• Resource centre PARADOX
• Resource centre IFIN

Annotating on SGE

todo

Annotating on LoadLeveler

todo

'Recognizable Application Names

• CompChem VRC
  • CFDOF
  • CompChem
  • FMD-PA
  • HC-MD-QM-CS
  • ISyMAB
  • MDCisplatin
  • PCACIC

• CompPhys VRC
  • AMR_PAR
  • EagleEye
  • FAMAD
  • FuzzyCmeans
  • GENETATOMICS
  • GIM
  • HAG
  • HMLQCD
  • NUQG
  • SET
  • SFHG
  • SIMPLE-TS_2D

• LifeSci VRC
  • CMSLTM
  • DeepAligner
  • DiseaseGene
  • DNAMA
  • MDSCS
  • miRs
  • MSBP

• NewApps VRC
  • ISTORM
  • ARP23
  • HPS
  • CQS
  • TDN-SIM
  • TCR-MHC
  • DynAPSNeur
  • IPA2SPE
  • HGRF
  • NUM-EXP-NAT-CONV
  • PhyloTree
  • SU3-GT
  • PALSC-AMC

• FastTrack VRC
  • LNAWENR
  • ARMSATGEO
  • SyMBA_GPU